How to search
0.Choose the reference genome (Even though you prefer the current version, you have to choose by clicking to active feeding to the active function of javascript)
1. Put your fusion gene symbol
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
Search fusion genes
Human genome version
Example) GRCh37 or GRCh38
Search by genes
5'-Gene:
3'-Gene:
Example) 5'-Gene: BCR and 3'-Gene: ABL1
Search by BPs
5'-BP:
3'-BP:
Example) 5'-BP: chr22:23632600 and 3'-BP: chr9:133729451
Batch search by fusion gene pairs
Example)
Batch search by fusion gene BPs
Example)
Batch search by structural variant vcf file
(We will check whether two breakpoints with SVTYPE of DEL, DUP, INV, CNV, BND, CPX, CTX from.) the VCF standard
Example)
nstd33.GRCh38.variant_call.vcf
from dbVar
aaa
Identified fusion genes
FGviewer hyperlinks for the identified fusion genes